Multi-omics data integration, interpretation, and its application

I Subramanian, S Verma, S Kumar… - … and biology insights, 2020 - journals.sagepub.com
… the tools and methods that adopt integrative approach to analyze … This method uses a
Bayesian nonparametric model (… of integrative approach that helps in advancement of treatment

Multilevel assessment of carbamazepine effects: An integrative approach using zebrafish early-life stages

ML da Silva, TS Andrade, RAR Villacis… - Chemosphere, 2024 - Elsevier
… The test was performed using 60 eggs per treatment, divided into 3 … Dunn's test (for parametric
or non-parametric data, respectively) was … In this work, the microarray results indicate that …

[HTML][HTML] Interplay of Machine Learning and Bioinformatics Approaches to Identify Genetic Biomarkers that Affect Survival of Patients with Glioblastoma

NK Podder, HK Rana, AK Puza, MI Hasan… - Informatics in Medicine …, 2024 - Elsevier
techniques have previously been used with microarray data. … is non-parametric, large in
size, and consists of mRNA-Z-score values. The Kruskal-Wallis test is a non-parametric method

Multi-omics data integration approaches for precision oncology

R Correa-Aguila, N Alonso-Pupo… - Molecular …, 2022 - pubs.rsc.org
… -making process in the diagnosis and clinical management of … This technique has been
successfully applied to microarray … Kernel methods are powerful nonparametric modeling tools …

Overall survival prediction of non-small cell lung cancer by integrating microarray and clinical data with deep learning

YH Lai, WN Chen, TC Hsu, C Lin, Y Tsao, S Wu - Scientific reports, 2020 - nature.com
… from the integrative DNN. We also demonstrated … prognostic performance for survival
analysis. This highlights the benefit of integrating microarray and clinical data via our integrative

[HTML][HTML] Computational advances of tumor marker selection and sample classification in cancer proteomics

J Tang, Y Wang, Y Luo, J Fu, Y Zhang, Y Li… - Computational and …, 2020 - Elsevier
… for the treatment of oncologic diseases. To facilitate cancer … non-parametric methods
Clin Cancer Res. 18:3677–85, 2012 … of Microarrays SAM samr (sam) The SAM is non-parametric

[HTML][HTML] Microarray cancer feature selection: Review, challenges and research directions

MA Hambali, TO Oladele, KS Adewole - International Journal of Cognitive …, 2020 - Elsevier
… such as diseases prediction and diagnosis, cancer study and … a comprehensive survey
of studies on microarray cancer … actually survey the comprehensive approaches employed. …

A multi-dimensional approach to unravel the intricacies of lactylation related signature for prognostic and therapeutic insight in colorectal cancer

H Huang, K Chen, Y Zhu, Z Hu, Y Wang, J Chen… - Journal of Translational …, 2024 - Springer
prognostic factor for CRC. Through a comprehensive analysis integrating tumor tissue arrays
, and nonparametric methods, such as Kruskal–Wallis tests. To explore linear relationships, …

Autoantibody signatures discovered by HuProt protein microarray to enhance the diagnosis of lung cancer

Y Wang, J Li, X Zhang, M Liu, L Ji, T Yang, K Wang… - Clinical …, 2023 - Elsevier
… by means of protein microarray and their serum level … protein microarray is an efficient
approach in discovering novel TAAbs which could be used as biomarkers in lung cancer diagnosis

Gene co-expression in the interactome: moving from correlation toward causation via an integrated approach to disease module discovery

P Paci, G Fiscon, F Conte, RS Wang, L Farina… - NPJ systems biology …, 2021 - nature.com
… may support rational, personalized planning of disease prevention or treatment. … microarray
gene expression profiling of lung or airway tissue from subjects with COPD obtained using